Safety, quality & education

Structural and functional alteration of the gut microbiomes in intensive care unit (ICU) staff: a cross-sectional analysis

Crit CarePublished Cross-sectional study

Authors' conclusion

Our findings indicated that ICU staff exhibited a reduction in gut microbiome diversity which was associated with an increase in virulence factors and carbohydrate-active enzymes, as well as with a heightened susceptibility to endocrine and metabolic diseases and cancers.

Study context

Population
ICU staff and non-medical individuals (fecal samples)
Participants
39 vs 39
Exposure
ICU staff vs non-medical subjects
  • ICU staffn = 39
  • Non-medicaln = 39reference
Outcome
Taxonomic and functional characteristics of gut microbiomes
Methodological detailsprospective, metagenomic sequencing
  • Prospective
  • Metagenomic sequencing

Main finding

As reported in the abstract

Gut microbiome taxonomy and function
  • Significant decrease in gut microbiome diversity in ICU staff
  • Marked decline in Actinobacteria; substantial increase in Bacteroides and Bacteroidaceae in ICU staff
  • Notable increase in carbohydrate-active enzymes (CAZy) in ICU staff
  • Kyoto Encyclopedia of Genes and Genomes (KEGG): elevated risk of endocrine and metabolic disorders, enhanced glycan biosynthesis and metabolism
  • KEGG pathway enrichment: significant enrichment in cancer-related pathways
  • Virulence Factor Database (VFDB): higher abundance of virulence factors (immune modulation, invasion, antimicrobial activity/competitive advantage) in ICU staff
  • No discernible difference in antibiotic resistance genes between groups
  • All differences demonstrated clear gender disparities

Observational data: associations, not effects.

Original publication

Structural and functional alteration of the gut microbiomes in ICU staff: a cross-sectional analysis. Crit Care. Published 31 March 2025. doi:10.1186/s13054-025-05379-7

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