Significance of positive semi-quantitative PCR tests on bronchoalveolar lavage for Pneumocystis jirovecii pneumonia in HIV-negative immunocompromised intensive care unit (ICU) patients with acute respiratory failure

Ann Intensive CarePublished Retrospective diagnostic accuracy study

Authors' conclusion

Semi-quantitative PJ PCR was accurate in diagnosing PJP in non-HIV ICU patients with acute respiratory failure (ARF), and a Ct at low cycle values was more frequent in confirmed PJP than in colonization. The optimal Ct threshold was 30.

Study context

Population
Non-HIV immunocompromised ICU patients with acute respiratory failure (ARF) with at least one PJ Real-time PCR (rt-PCR) on broncho-alveolar lavage (BAL), 2013–202359 (12%) positive test
Participants
481 participants
Comparison
PJ rt-PCR cycle threshold (Ct) value across confirmed, uncertain and ruled-out Pneumocystis jirovecii pneumonia (PJP)
Outcome
Ct threshold 30 (confirmed vs ruled-out)
Methodological detailsreviewers blinded to Ct values
  • Reviewers blinded to Ct values

Performance

As reported in the abstract

AUC

0.931 (95% CI [0.850-1.0])

Sensitivity

86%

Specificity

89%

Further findings

Median Ct · differed significantly

Median serum BDG · differed significantly

rt-PCR overall accuracy

Sensitivity
100% (95% CI = [85.7-100%])
Specificity
94% (95% CI = [91.4-95.8%])

Parts of this Brief are withheld: the automatic checks could not confirm them against the abstract.

Original publication

Significance of positive semi-quantitative PCR tests on bronchoalveolar lavage for Pneumocystis jirovecii pneumonia in HIV-negative immunocompromised ICU patients with acute respiratory failure. Ann Intensive Care. Published 27 October 2025. doi:10.1186/s13613-025-01568-3

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