Sepsis & infection

Whole blood transcriptomics identifies subclasses of pediatric septic shock

Crit CarePublished Secondary analysis of the CAF-PINT ancillary of the HALF-PINT study

Authors' conclusion

Two subclasses of pediatric septic shock patients were discovered through genome-wide expression profiling based on whole blood RNA sequencing with major biological and clinical differences.

Study context

Population
Critically ill children with cardiopulmonary failure in a randomised insulin titration trial to treat hyperglycemia; children with septic shock46 septic shock, 52 controls
Comparison
Subclass 1 vs Subclass 2 of pediatric septic shock
  • Controlsn = 52
Primary endpoint
Identification of pediatric septic shock subclasses based on whole blood RNA expression profiles
Methodological detailsobservational, genome-wide expression profiling (RNA sequencing), hierarchical clustering
  • Observational
  • Genome-wide expression profiling (RNA sequencing)
  • Hierarchical clustering

Primary result

As reported in the abstract

Septic shock subclasses
  • Two subtypes identified among patients with septic shock based on gene expression patterns
  • Subclass 1 vs Subclass 2: upregulation of innate and downregulation of adaptive immunity pathways
  • Subclass 1 had significantly worse clinical outcomes despite similar illness severity on initial presentation
  • Subclass 1: elevated plasma inflammatory cytokines and endothelial injury biomarkers, decreased % CD4 T cells and B cells, less diverse T cell receptor repertoires

Further findings

Septic shock vs controls

Alterations in innate and adaptive immune pathways in septic shock

Original publication

Whole blood transcriptomics identifies subclasses of pediatric septic shock. Crit Care. Published 8 December 2023. doi:10.1186/s13054-023-04689-y

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